SVMcon: Protein Contact Map Prediction Using

Support Vector Machine and a Large Feature Set

(Download SVMcon 1.0 software and source code (Linux version))

Email address (where the prediction will be sent):

Target Name (required):


Protein sequence (one plain sequence, no headers, at most 400 residues):

Note: Predicted residue-residue contacts in CASP format (residue index 1, residue index 2, 0, 8, contact probability) will be sent to the email address. The contact distance threshold is 8 angstrom. Sequence length limit for the sever is 400 residues.
Reference: J. Cheng and P. Baldi. Improved Residue Contact Prediction Using Support Vector Machines and a Large Feature Set. BMC Bioinfomatics. 8:113, 2007.
Dr. Jianlin Cheng's Bioinformatics and Systems Biology Laboratory
Department of Computer Science
University of Missouri Columbia